Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CK1_04860 | CK1_04870 | CK1_04860 | CK1_04870 | Riboflavin biosynthesis protein RibD. | Pyrimidine reductase, riboflavin biosynthesis. | 0.994 |
CK1_04860 | CK1_08030 | CK1_04860 | CK1_08030 | Riboflavin biosynthesis protein RibD. | Dihydroneopterin aldolase/2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin. | 0.797 |
CK1_04860 | CK1_18060 | CK1_04860 | CK1_18060 | Riboflavin biosynthesis protein RibD. | Nicotinate-nucleotide pyrophosphorylase. | 0.528 |
CK1_04860 | nadD | CK1_04860 | CK1_11110 | Riboflavin biosynthesis protein RibD. | Nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD). | 0.658 |
CK1_04860 | nadE | CK1_04860 | CK1_36720 | Riboflavin biosynthesis protein RibD. | NAD+ synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source. | 0.694 |
CK1_04870 | CK1_04860 | CK1_04870 | CK1_04860 | Pyrimidine reductase, riboflavin biosynthesis. | Riboflavin biosynthesis protein RibD. | 0.994 |
CK1_04870 | CK1_08030 | CK1_04870 | CK1_08030 | Pyrimidine reductase, riboflavin biosynthesis. | Dihydroneopterin aldolase/2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin. | 0.797 |
CK1_04870 | CK1_18060 | CK1_04870 | CK1_18060 | Pyrimidine reductase, riboflavin biosynthesis. | Nicotinate-nucleotide pyrophosphorylase. | 0.585 |
CK1_04870 | nadD | CK1_04870 | CK1_11110 | Pyrimidine reductase, riboflavin biosynthesis. | Nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD). | 0.658 |
CK1_04870 | nadE | CK1_04870 | CK1_36720 | Pyrimidine reductase, riboflavin biosynthesis. | NAD+ synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source. | 0.694 |
CK1_05130 | CK1_05140 | CK1_05130 | CK1_05140 | Hypothetical protein. | Aspartate oxidase. | 0.984 |
CK1_05130 | CK1_18060 | CK1_05130 | CK1_18060 | Hypothetical protein. | Nicotinate-nucleotide pyrophosphorylase. | 0.691 |
CK1_05130 | nadE | CK1_05130 | CK1_36720 | Hypothetical protein. | NAD+ synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source. | 0.470 |
CK1_05140 | CK1_05130 | CK1_05140 | CK1_05130 | Aspartate oxidase. | Hypothetical protein. | 0.984 |
CK1_05140 | CK1_18060 | CK1_05140 | CK1_18060 | Aspartate oxidase. | Nicotinate-nucleotide pyrophosphorylase. | 0.691 |
CK1_05140 | nadE | CK1_05140 | CK1_36720 | Aspartate oxidase. | NAD+ synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source. | 0.470 |
CK1_08030 | CK1_04860 | CK1_08030 | CK1_04860 | Dihydroneopterin aldolase/2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin. | Riboflavin biosynthesis protein RibD. | 0.797 |
CK1_08030 | CK1_04870 | CK1_08030 | CK1_04870 | Dihydroneopterin aldolase/2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin. | Pyrimidine reductase, riboflavin biosynthesis. | 0.797 |
CK1_08030 | CK1_18060 | CK1_08030 | CK1_18060 | Dihydroneopterin aldolase/2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin. | Nicotinate-nucleotide pyrophosphorylase. | 0.538 |
CK1_08030 | nadD | CK1_08030 | CK1_11110 | Dihydroneopterin aldolase/2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin. | Nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD). | 0.714 |
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