STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CK1_21200Ferrous iron transporter FeoB; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family. (727 aa)    
Predicted Functional Partners:
CK1_21210
Fe2+ transport system protein A.
 
  
 0.971
CK1_21220
Fe2+ transport system protein A.
 
  
 0.866
CK1_02070
Small GTP-binding protein domain.
 
  
0.652
CK1_21180
Copper chaperone.
  
  
 0.592
CK1_21190
Hypothetical protein.
       0.570
CK1_05800
Pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric.
     
 0.491
CK1_08220
Copper-(or silver)-translocating P-type ATPase.
  
 
 0.450
Your Current Organism:
Ruminococcus sp. SR15
NCBI taxonomy Id: 657323
Other names: R. sp. SR1/5, Ruminococcus sp. SR1/5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.