STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CK1_25560FAD/FMN-containing dehydrogenases. (472 aa)    
Predicted Functional Partners:
CK1_25570
Electron transfer flavoprotein, alpha subunit.
 
 
 0.999
CK1_25580
Electron transfer flavoprotein, beta subunit.
 
 
 0.995
CK1_04740
Phosphoglycolate phosphatase; Haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E.
    
 0.910
CK1_04910
Predicted phosphatases.
    
 0.910
CK1_19850
Phosphoglycolate phosphatase; Haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED/haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E.
    
 0.910
CK1_34080
Phosphoglycolate phosphatase; Haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E.
    
 0.910
atpD
ATP synthase F1 subcomplex beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.
    
 0.868
CK1_25550
Uncharacterized membrane protein.
 
     0.863
CK1_27430
Fe-S oxidoreductase.
  
 
 0.676
CK1_05800
Pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric.
   
 
 0.631
Your Current Organism:
Ruminococcus sp. SR15
NCBI taxonomy Id: 657323
Other names: R. sp. SR1/5, Ruminococcus sp. SR1/5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.