STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CIY_03350RelB antitoxin. (66 aa)    
Predicted Functional Partners:
CIY_03360
Addiction module toxin, RelE/StbE family.
 
 0.992
CIY_03340
Hypothetical protein.
       0.697
CIY_30060
Looped-hinge helix DNA binding domain, AbrB family.
 
  
 0.600
CIY_26930
Uncharacterized protein conserved in bacteria.
 
     0.495
CIY_33550
Predicted transcriptional regulators.
  
  
 0.453
CIY_24080
Uncharacterized conserved protein.
    
 0.447
CIY_03370
Hypothetical protein.
       0.438
CIY_03330
Hypothetical protein.
       0.422
CIY_04090
Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system.
  
 
 0.405
Your Current Organism:
Butyrivibrio fibrisolvens 164
NCBI taxonomy Id: 657324
Other names: B. fibrisolvens 16/4, Butyrivibrio fibrisolvens 16/4, Butyrivibrio fibrisolvens str. 16/4, Butyrivibrio fibrisolvens strain 16/4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.