STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CIY_11520ABC-type metal ion transport system, permease component. (219 aa)    
Predicted Functional Partners:
CIY_11510
ABC-type metal ion transport system, ATPase component; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Methionine importer (TC 3.A.1.24) family.
 
 0.999
CIY_11530
ABC-type metal ion transport system, periplasmic component/surface antigen; Belongs to the nlpA lipoprotein family.
 0.999
metAA
Homoserine O-succinyltransferase; Transfers an acetyl group from acetyl-CoA to L-homoserine, forming acetyl-L-homoserine; Belongs to the MetA family.
  
  
 0.675
CIY_21660
Amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family.
    
 0.664
CIY_22260
Amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family.
    
 0.664
CIY_23130
ABC-type amino acid transport system, permease component.
    
 0.664
CIY_23140
Hypothetical protein.
    
 0.664
CIY_16650
ABC-type spermidine/putrescine transport system, permease component II.
   
 
  0.651
CIY_11480
Amino acid ABC transporter ATP-binding protein, PAAT family (TC 3.A.1.3.-).
    
 0.617
CIY_11440
Amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-).
    
 0.592
Your Current Organism:
Butyrivibrio fibrisolvens 164
NCBI taxonomy Id: 657324
Other names: B. fibrisolvens 16/4, Butyrivibrio fibrisolvens 16/4, Butyrivibrio fibrisolvens str. 16/4, Butyrivibrio fibrisolvens strain 16/4
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