STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CIY_11980Ferrous iron transporter FeoB; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family. (680 aa)    
Predicted Functional Partners:
CIY_10960
Ferrous iron transporter FeoB.
 
  
0.804
CIY_11650
Copper-(or silver)-translocating P-type ATPase.
  
 
 0.702
CIY_18980
Uncharacterized conserved protein.
     
 0.656
CIY_10780
Fe2+/Zn2+ uptake regulation proteins; Belongs to the Fur family.
     
 0.649
CIY_10260
Pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric.
 
   
 0.622
CIY_04880
ABC-type transport system involved in Fe-S cluster assembly, ATPase component.
     
 0.565
CIY_11630
Predicted divalent heavy-metal cations transporter.
     
 0.553
CIY_15210
Ammonium transporter; Belongs to the P(II) protein family.
  
  
 0.550
topA
DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...]
      
 0.534
CIY_02230
Predicted beta-xylosidase.
  
  
 0.533
Your Current Organism:
Butyrivibrio fibrisolvens 164
NCBI taxonomy Id: 657324
Other names: B. fibrisolvens 16/4, Butyrivibrio fibrisolvens 16/4, Butyrivibrio fibrisolvens str. 16/4, Butyrivibrio fibrisolvens strain 16/4
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