STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CIY_12540Hypothetical protein. (1214 aa)    
Predicted Functional Partners:
CIY_12630
LPXTG-site transpeptidase (sortase) family protein.
 
   
 0.803
CIY_32850
Cna protein B-type domain./Gram positive anchor.
 
   
 0.766
CIY_32840
LPXTG-site transpeptidase (sortase) family protein.
 
   
 0.763
CIY_21980
Endoglucanase.
   
 
 0.669
CIY_21950
Endoglucanase.
    
 
 0.630
CIY_09440
LPXTG-site transpeptidase (sortase) family protein.
 
   
 0.617
CIY_15650
Protein of unknown function (DUF2974).
 
 0.613
CIY_15260
Bacterial Ig-like domain (group 2)./Subtilase family; Belongs to the peptidase S8 family.
  
 
 0.612
CIY_23740
Beta-1,4-xylanase.
    
 0.601
CIY_12550
Cna protein B-type domain.
 
    
0.600
Your Current Organism:
Butyrivibrio fibrisolvens 164
NCBI taxonomy Id: 657324
Other names: B. fibrisolvens 16/4, Butyrivibrio fibrisolvens 16/4, Butyrivibrio fibrisolvens str. 16/4, Butyrivibrio fibrisolvens strain 16/4
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.