Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CIY_00350 | CIY_17170 | CIY_00350 | CIY_17170 | Isoleucyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | glutaminyl-tRNA synthetase. | 0.951 |
CIY_00350 | CIY_17970 | CIY_00350 | CIY_17970 | Isoleucyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | Leucyl-tRNA synthetase. | 0.922 |
CIY_00350 | CIY_17980 | CIY_00350 | CIY_17980 | Isoleucyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | Leucyl-tRNA synthetase. | 0.925 |
CIY_00350 | argS | CIY_00350 | CIY_15300 | Isoleucyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | arginyl-tRNA synthetase. | 0.965 |
CIY_00350 | asnS | CIY_00350 | CIY_07910 | Isoleucyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | asparaginyl-tRNA synthetase. | 0.919 |
CIY_00350 | gltX | CIY_00350 | CIY_21430 | Isoleucyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | glutamyl-tRNA synthetase, bacterial family; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu); Belongs to the class-I aminoacyl-tRNA synthetase family. Glutamate--tRNA ligase type 1 subfamily. | 0.944 |
CIY_00350 | metG | CIY_00350 | CIY_30800 | Isoleucyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation. | 0.958 |
CIY_00350 | pheT | CIY_00350 | CIY_14870 | Isoleucyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | phenylalanyl-tRNA synthetase, beta subunit, non-spirochete bacterial; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. | 0.921 |
CIY_00350 | proS | CIY_00350 | CIY_05570 | Isoleucyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | prolyl-tRNA synthetase, family I; Catalyzes the attachment of proline to tRNA(Pro) in a two- step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA(Pro). | 0.982 |
CIY_00350 | topA | CIY_00350 | CIY_21340 | Isoleucyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.416 |
CIY_17170 | CIY_00350 | CIY_17170 | CIY_00350 | glutaminyl-tRNA synthetase. | Isoleucyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.951 |
CIY_17170 | CIY_17970 | CIY_17170 | CIY_17970 | glutaminyl-tRNA synthetase. | Leucyl-tRNA synthetase. | 0.923 |
CIY_17170 | CIY_17980 | CIY_17170 | CIY_17980 | glutaminyl-tRNA synthetase. | Leucyl-tRNA synthetase. | 0.923 |
CIY_17170 | argS | CIY_17170 | CIY_15300 | glutaminyl-tRNA synthetase. | arginyl-tRNA synthetase. | 0.965 |
CIY_17170 | asnS | CIY_17170 | CIY_07910 | glutaminyl-tRNA synthetase. | asparaginyl-tRNA synthetase. | 0.904 |
CIY_17170 | metG | CIY_17170 | CIY_30800 | glutaminyl-tRNA synthetase. | methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation. | 0.978 |
CIY_17170 | pheT | CIY_17170 | CIY_14870 | glutaminyl-tRNA synthetase. | phenylalanyl-tRNA synthetase, beta subunit, non-spirochete bacterial; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. | 0.789 |
CIY_17170 | proS | CIY_17170 | CIY_05570 | glutaminyl-tRNA synthetase. | prolyl-tRNA synthetase, family I; Catalyzes the attachment of proline to tRNA(Pro) in a two- step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA(Pro). | 0.994 |
CIY_17970 | CIY_00350 | CIY_17970 | CIY_00350 | Leucyl-tRNA synthetase. | Isoleucyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.922 |
CIY_17970 | CIY_17170 | CIY_17970 | CIY_17170 | Leucyl-tRNA synthetase. | glutaminyl-tRNA synthetase. | 0.923 |
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