STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CIY_19080HD domain. (100 aa)    
Predicted Functional Partners:
CIY_19070
Hypothetical protein.
       0.723
CIY_19090
Predicted membrane protein.
       0.706
CIY_08030
Helix-turn-helix.
  
     0.514
CIY_04290
Hypothetical protein.
  
     0.503
CIY_06290
Hypothetical protein.
  
     0.494
CIY_19060
ADP-ribose pyrophosphatase.
       0.493
CIY_14160
Predicted transcriptional regulators.
  
     0.489
CIY_19100
Hypothetical protein.
       0.464
CIY_06730
Hypothetical protein.
  
     0.457
CIY_10010
Helix-turn-helix.
  
     0.456
Your Current Organism:
Butyrivibrio fibrisolvens 164
NCBI taxonomy Id: 657324
Other names: B. fibrisolvens 16/4, Butyrivibrio fibrisolvens 16/4, Butyrivibrio fibrisolvens str. 16/4, Butyrivibrio fibrisolvens strain 16/4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.