STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CIY_19220Beta-glucosidase-related glycosidases. (585 aa)    
Predicted Functional Partners:
CIY_19230
Beta-phosphoglucomutase.
      0.896
CIY_24490
N-acetylmuramoyl-L-alanine amidase.
 
  
 0.633
CIY_02220
Beta-phosphoglucomutase.
      0.609
CIY_03710
N-acetylmuramoyl-L-alanine amidase.
  
  
 0.564
CIY_33390
N-acetylmuramoyl-L-alanine amidase.
    
 0.510
CIY_19200
Bacterial alpha-L-rhamnosidase.
 
     0.457
CIY_19130
AraC-like ligand binding domain.
  
     0.426
Your Current Organism:
Butyrivibrio fibrisolvens 164
NCBI taxonomy Id: 657324
Other names: B. fibrisolvens 16/4, Butyrivibrio fibrisolvens 16/4, Butyrivibrio fibrisolvens str. 16/4, Butyrivibrio fibrisolvens strain 16/4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.