Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
CIY_11750 | CIY_11770 | ABC-type nitrate/sulfonate/bicarbonate transport system, permease component. | Hypothetical protein. | 0.978 |
CIY_11750 | CIY_11780 | ABC-type nitrate/sulfonate/bicarbonate transport system, permease component. | ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component. | 0.997 |
CIY_11750 | CIY_21660 | ABC-type nitrate/sulfonate/bicarbonate transport system, permease component. | Amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family. | 0.724 |
CIY_11750 | CIY_22260 | ABC-type nitrate/sulfonate/bicarbonate transport system, permease component. | Amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family. | 0.724 |
CIY_11750 | CIY_23130 | ABC-type nitrate/sulfonate/bicarbonate transport system, permease component. | ABC-type amino acid transport system, permease component. | 0.724 |
CIY_11750 | CIY_23140 | ABC-type nitrate/sulfonate/bicarbonate transport system, permease component. | Hypothetical protein. | 0.724 |
CIY_11750 | CIY_24950 | ABC-type nitrate/sulfonate/bicarbonate transport system, permease component. | ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components. | 0.855 |
CIY_11750 | CIY_24970 | ABC-type nitrate/sulfonate/bicarbonate transport system, permease component. | ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component. | 0.831 |
CIY_11750 | CIY_24980 | ABC-type nitrate/sulfonate/bicarbonate transport system, permease component. | Hypothetical protein. | 0.773 |
CIY_11770 | CIY_11750 | Hypothetical protein. | ABC-type nitrate/sulfonate/bicarbonate transport system, permease component. | 0.978 |
CIY_11770 | CIY_11780 | Hypothetical protein. | ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component. | 0.992 |
CIY_11770 | CIY_21660 | Hypothetical protein. | Amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family. | 0.668 |
CIY_11770 | CIY_22260 | Hypothetical protein. | Amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family. | 0.668 |
CIY_11770 | CIY_23130 | Hypothetical protein. | ABC-type amino acid transport system, permease component. | 0.668 |
CIY_11770 | CIY_23140 | Hypothetical protein. | Hypothetical protein. | 0.668 |
CIY_11770 | CIY_24950 | Hypothetical protein. | ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components. | 0.756 |
CIY_11770 | CIY_24960 | Hypothetical protein. | ABC-type nitrate/sulfonate/bicarbonate transport system, permease component. | 0.780 |
CIY_11770 | CIY_24970 | Hypothetical protein. | ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component. | 0.733 |
CIY_11780 | CIY_11750 | ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component. | ABC-type nitrate/sulfonate/bicarbonate transport system, permease component. | 0.997 |
CIY_11780 | CIY_11770 | ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component. | Hypothetical protein. | 0.992 |
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