Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CIY_00930 | CIY_03440 | CIY_00930 | CIY_03440 | Hypothetical protein. | Protein of unknown function (DUF3298). | 0.648 |
CIY_00930 | CIY_06000 | CIY_00930 | CIY_06000 | Hypothetical protein. | Hypothetical protein. | 0.674 |
CIY_00930 | CIY_27540 | CIY_00930 | CIY_27540 | Hypothetical protein. | Hypothetical protein. | 0.516 |
CIY_00930 | CIY_27550 | CIY_00930 | CIY_27550 | Hypothetical protein. | Hypothetical protein. | 0.500 |
CIY_00930 | CIY_32440 | CIY_00930 | CIY_32440 | Hypothetical protein. | Plasmid recombination enzyme. | 0.616 |
CIY_03440 | CIY_00930 | CIY_03440 | CIY_00930 | Protein of unknown function (DUF3298). | Hypothetical protein. | 0.648 |
CIY_03440 | CIY_06000 | CIY_03440 | CIY_06000 | Protein of unknown function (DUF3298). | Hypothetical protein. | 0.769 |
CIY_03440 | CIY_27540 | CIY_03440 | CIY_27540 | Protein of unknown function (DUF3298). | Hypothetical protein. | 0.585 |
CIY_03440 | CIY_27550 | CIY_03440 | CIY_27550 | Protein of unknown function (DUF3298). | Hypothetical protein. | 0.626 |
CIY_03440 | CIY_27580 | CIY_03440 | CIY_27580 | Protein of unknown function (DUF3298). | Glycosyltransferases involved in cell wall biogenesis. | 0.425 |
CIY_03440 | CIY_32440 | CIY_03440 | CIY_32440 | Protein of unknown function (DUF3298). | Plasmid recombination enzyme. | 0.767 |
CIY_06000 | CIY_00930 | CIY_06000 | CIY_00930 | Hypothetical protein. | Hypothetical protein. | 0.674 |
CIY_06000 | CIY_03440 | CIY_06000 | CIY_03440 | Hypothetical protein. | Protein of unknown function (DUF3298). | 0.769 |
CIY_06000 | CIY_27540 | CIY_06000 | CIY_27540 | Hypothetical protein. | Hypothetical protein. | 0.681 |
CIY_06000 | CIY_27550 | CIY_06000 | CIY_27550 | Hypothetical protein. | Hypothetical protein. | 0.751 |
CIY_06000 | CIY_27580 | CIY_06000 | CIY_27580 | Hypothetical protein. | Glycosyltransferases involved in cell wall biogenesis. | 0.419 |
CIY_06000 | CIY_32440 | CIY_06000 | CIY_32440 | Hypothetical protein. | Plasmid recombination enzyme. | 0.769 |
CIY_25660 | CIY_27550 | CIY_25660 | CIY_27550 | dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family. | Hypothetical protein. | 0.599 |
CIY_25660 | CIY_27560 | CIY_25660 | CIY_27560 | dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family. | Hypothetical protein. | 0.599 |
CIY_25660 | CIY_28130 | CIY_25660 | CIY_28130 | dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family. | dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family. | 0.900 |
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