Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 annotation | node2 annotation | score |
| CIY_14370 | CIY_28420 | Hypothetical protein. | Flagellar biosynthetic protein FliS. | 0.486 |
| CIY_14370 | CIY_28430 | Hypothetical protein. | Flagellar capping protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | 0.724 |
| CIY_14370 | CIY_28470 | Hypothetical protein. | Flagellin and related hook-associated proteins. | 0.815 |
| CIY_14370 | CIY_28500 | Hypothetical protein. | Flagellar hook-associated protein. | 0.830 |
| CIY_14370 | CIY_28520 | Hypothetical protein. | FlgN protein. | 0.914 |
| CIY_14370 | CIY_28530 | Hypothetical protein. | Anti-sigma-28 factor, FlgM. | 0.934 |
| CIY_14370 | CIY_29380 | Hypothetical protein. | Flagellar protein FliS. | 0.698 |
| CIY_20910 | CIY_20920 | DNA-directed RNA polymerase specialized sigma subunit. | RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG; Belongs to the sigma-70 factor family. | 0.983 |
| CIY_20910 | CIY_28420 | DNA-directed RNA polymerase specialized sigma subunit. | Flagellar biosynthetic protein FliS. | 0.716 |
| CIY_20910 | CIY_28430 | DNA-directed RNA polymerase specialized sigma subunit. | Flagellar capping protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | 0.635 |
| CIY_20910 | CIY_28470 | DNA-directed RNA polymerase specialized sigma subunit. | Flagellin and related hook-associated proteins. | 0.484 |
| CIY_20910 | CIY_28500 | DNA-directed RNA polymerase specialized sigma subunit. | Flagellar hook-associated protein. | 0.623 |
| CIY_20910 | CIY_28520 | DNA-directed RNA polymerase specialized sigma subunit. | FlgN protein. | 0.684 |
| CIY_20910 | CIY_28530 | DNA-directed RNA polymerase specialized sigma subunit. | Anti-sigma-28 factor, FlgM. | 0.934 |
| CIY_20910 | CIY_29380 | DNA-directed RNA polymerase specialized sigma subunit. | Flagellar protein FliS. | 0.561 |
| CIY_20920 | CIY_20910 | RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG; Belongs to the sigma-70 factor family. | DNA-directed RNA polymerase specialized sigma subunit. | 0.983 |
| CIY_20920 | CIY_28420 | RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG; Belongs to the sigma-70 factor family. | Flagellar biosynthetic protein FliS. | 0.662 |
| CIY_20920 | CIY_28430 | RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG; Belongs to the sigma-70 factor family. | Flagellar capping protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | 0.635 |
| CIY_20920 | CIY_28470 | RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG; Belongs to the sigma-70 factor family. | Flagellin and related hook-associated proteins. | 0.632 |
| CIY_20920 | CIY_28500 | RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG; Belongs to the sigma-70 factor family. | Flagellar hook-associated protein. | 0.688 |
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