Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CIY_29600 | CIY_29610 | CIY_29600 | CIY_29610 | Hypothetical protein. | Hypothetical protein. | 0.777 |
CIY_29600 | CIY_29620 | CIY_29600 | CIY_29620 | Hypothetical protein. | Deoxycytidylate deaminase. | 0.695 |
CIY_29600 | CIY_29630 | CIY_29600 | CIY_29630 | Hypothetical protein. | Protein-tyrosine-phosphatase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family. | 0.627 |
CIY_29600 | CIY_29640 | CIY_29600 | CIY_29640 | Hypothetical protein. | Sua5/YciO/YrdC/YwlC family protein; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. | 0.557 |
CIY_29610 | CIY_29600 | CIY_29610 | CIY_29600 | Hypothetical protein. | Hypothetical protein. | 0.777 |
CIY_29610 | CIY_29620 | CIY_29610 | CIY_29620 | Hypothetical protein. | Deoxycytidylate deaminase. | 0.768 |
CIY_29610 | CIY_29630 | CIY_29610 | CIY_29630 | Hypothetical protein. | Protein-tyrosine-phosphatase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family. | 0.745 |
CIY_29610 | CIY_29640 | CIY_29610 | CIY_29640 | Hypothetical protein. | Sua5/YciO/YrdC/YwlC family protein; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. | 0.622 |
CIY_29620 | CIY_29600 | CIY_29620 | CIY_29600 | Deoxycytidylate deaminase. | Hypothetical protein. | 0.695 |
CIY_29620 | CIY_29610 | CIY_29620 | CIY_29610 | Deoxycytidylate deaminase. | Hypothetical protein. | 0.768 |
CIY_29620 | CIY_29630 | CIY_29620 | CIY_29630 | Deoxycytidylate deaminase. | Protein-tyrosine-phosphatase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family. | 0.780 |
CIY_29620 | CIY_29640 | CIY_29620 | CIY_29640 | Deoxycytidylate deaminase. | Sua5/YciO/YrdC/YwlC family protein; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. | 0.727 |
CIY_29620 | CIY_29650 | CIY_29620 | CIY_29650 | Deoxycytidylate deaminase. | Predicted glycosyl hydrolase; Belongs to the glycosyl hydrolase 18 family. | 0.589 |
CIY_29620 | polA | CIY_29620 | CIY_33520 | Deoxycytidylate deaminase. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. | 0.466 |
CIY_29630 | CIY_29600 | CIY_29630 | CIY_29600 | Protein-tyrosine-phosphatase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family. | Hypothetical protein. | 0.627 |
CIY_29630 | CIY_29610 | CIY_29630 | CIY_29610 | Protein-tyrosine-phosphatase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family. | Hypothetical protein. | 0.745 |
CIY_29630 | CIY_29620 | CIY_29630 | CIY_29620 | Protein-tyrosine-phosphatase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family. | Deoxycytidylate deaminase. | 0.780 |
CIY_29630 | CIY_29640 | CIY_29630 | CIY_29640 | Protein-tyrosine-phosphatase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family. | Sua5/YciO/YrdC/YwlC family protein; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. | 0.966 |
CIY_29630 | CIY_29650 | CIY_29630 | CIY_29650 | Protein-tyrosine-phosphatase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family. | Predicted glycosyl hydrolase; Belongs to the glycosyl hydrolase 18 family. | 0.608 |
CIY_29630 | glyA | CIY_29630 | CIY_09420 | Protein-tyrosine-phosphatase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family. | Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 0.511 |
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