Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CIY_06660 | CIY_07390 | CIY_06660 | CIY_07390 | DNA replication protein. | Hypothetical protein. | 0.443 |
CIY_06660 | CIY_19450 | CIY_06660 | CIY_19450 | DNA replication protein. | Hypothetical protein. | 0.744 |
CIY_06660 | CIY_29690 | CIY_06660 | CIY_29690 | DNA replication protein. | Domain of unknown function (DUF1858). | 0.486 |
CIY_06660 | CIY_30590 | CIY_06660 | CIY_30590 | DNA replication protein. | DNA polymerase sliding clamp subunit (PCNA homolog). | 0.806 |
CIY_07390 | CIY_06660 | CIY_07390 | CIY_06660 | Hypothetical protein. | DNA replication protein. | 0.443 |
CIY_07390 | CIY_29690 | CIY_07390 | CIY_29690 | Hypothetical protein. | Domain of unknown function (DUF1858). | 0.593 |
CIY_19450 | CIY_06660 | CIY_19450 | CIY_06660 | Hypothetical protein. | DNA replication protein. | 0.744 |
CIY_19450 | CIY_29690 | CIY_19450 | CIY_29690 | Hypothetical protein. | Domain of unknown function (DUF1858). | 0.594 |
CIY_19450 | CIY_30590 | CIY_19450 | CIY_30590 | Hypothetical protein. | DNA polymerase sliding clamp subunit (PCNA homolog). | 0.937 |
CIY_29690 | CIY_06660 | CIY_29690 | CIY_06660 | Domain of unknown function (DUF1858). | DNA replication protein. | 0.486 |
CIY_29690 | CIY_07390 | CIY_29690 | CIY_07390 | Domain of unknown function (DUF1858). | Hypothetical protein. | 0.593 |
CIY_29690 | CIY_19450 | CIY_29690 | CIY_19450 | Domain of unknown function (DUF1858). | Hypothetical protein. | 0.594 |
CIY_29690 | CIY_29700 | CIY_29690 | CIY_29700 | Domain of unknown function (DUF1858). | 4Fe-4S binding domain. | 0.477 |
CIY_29690 | CIY_30590 | CIY_29690 | CIY_30590 | Domain of unknown function (DUF1858). | DNA polymerase sliding clamp subunit (PCNA homolog). | 0.457 |
CIY_29690 | CIY_33320 | CIY_29690 | CIY_33320 | Domain of unknown function (DUF1858). | Hypothetical protein. | 0.539 |
CIY_29690 | mraZ | CIY_29690 | CIY_14900 | Domain of unknown function (DUF1858). | mraZ protein; Belongs to the MraZ family. | 0.418 |
CIY_29700 | CIY_29690 | CIY_29700 | CIY_29690 | 4Fe-4S binding domain. | Domain of unknown function (DUF1858). | 0.477 |
CIY_30590 | CIY_06660 | CIY_30590 | CIY_06660 | DNA polymerase sliding clamp subunit (PCNA homolog). | DNA replication protein. | 0.806 |
CIY_30590 | CIY_19450 | CIY_30590 | CIY_19450 | DNA polymerase sliding clamp subunit (PCNA homolog). | Hypothetical protein. | 0.937 |
CIY_30590 | CIY_29690 | CIY_30590 | CIY_29690 | DNA polymerase sliding clamp subunit (PCNA homolog). | Domain of unknown function (DUF1858). | 0.457 |
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