STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEH59323.1Polyhydroxyalkanoate synthase. (694 aa)    
Predicted Functional Partners:
SEH59344.1
Poly(3-hydroxybutyrate) depolymerase.
 
  
 0.987
SEH64031.1
3-oxoacyl-[acyl-carrier-protein] reductase.
  
 
 0.956
SEH90883.1
3-hydroxybutyryl-CoA dehydratase.
 
  
 0.945
SEH80999.1
3-hydroxyacyl-CoA dehydrogenase.
     
 0.914
SEI03023.1
Poly(3-hydroxybutyrate) depolymerase.
 
  
 0.904
SEH59285.1
Polyhydroxyalkanoate synthesis repressor PhaR.
 
   
 0.892
SEH69314.1
Polyhydroxyalkanoate synthase.
  
  
 
0.851
SEH84089.1
Phosphate butyryltransferase.
 
 0.775
SEH59304.1
Hypothetical protein.
 
   
 0.773
SEI13470.1
Enoyl-CoA hydratase/carnithine racemase.
     
 0.586
Your Current Organism:
Paracoccus alkenifer
NCBI taxonomy Id: 65735
Other names: CIP 105684, DSM 11593, P. alkenifer, strain A901/1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.