STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEH82961.1ABC-2 type transport system ATP-binding protein. (327 aa)    
Predicted Functional Partners:
SEH96470.1
Cu-processing system permease protein.
  
 0.914
SEH60403.1
ABC-2 type transport system permease protein.
 
 0.863
SEH63776.1
ABC-2 type transport system permease protein.
 
 0.847
SEI03953.1
ATP-binding cassette, subfamily B.
  
 
 
0.703
SEH83394.1
Hypothetical protein.
    
  0.674
SEH84312.1
ATP-binding cassette, subfamily B.
    
 
0.674
SEH96909.1
ATP-binding cassette, subfamily B.
 
  
 
0.674
SEI05865.1
ATP-binding cassette, subfamily B, multidrug efflux pump.
    
 
0.674
SEH82942.1
Uncharacterized conserved protein, contains Zn-finger domain.
 
     0.644
atpD
F-type H+-transporting ATPase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.
    
 
 0.618
Your Current Organism:
Paracoccus alkenifer
NCBI taxonomy Id: 65735
Other names: CIP 105684, DSM 11593, P. alkenifer, strain A901/1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.