Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEH66790.1 | SEH67575.1 | SAMN04488075_0679 | SAMN04488075_0726 | Phosphoglycolate phosphatase. | Glyoxylate reductase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.906 |
SEH66790.1 | SEH80044.1 | SAMN04488075_0679 | SAMN04488075_1136 | Phosphoglycolate phosphatase. | Lactate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.906 |
SEH66790.1 | SEH89159.1 | SAMN04488075_0679 | SAMN04488075_1658 | Phosphoglycolate phosphatase. | Glycolate oxidase iron-sulfur subunit. | 0.906 |
SEH66790.1 | SEH99098.1 | SAMN04488075_0679 | SAMN04488075_2126 | Phosphoglycolate phosphatase. | Phosphoglycolate phosphatase. | 0.965 |
SEH66790.1 | SEI07419.1 | SAMN04488075_0679 | SAMN04488075_2633 | Phosphoglycolate phosphatase. | Phosphoglycolate phosphatase; Specifically catalyzes the dephosphorylation of 2- phosphoglycolate. Is involved in the dissimilation of the intracellular 2-phosphoglycolate formed during the DNA repair of 3'-phosphoglycolate ends, a major class of DNA lesions induced by oxidative stress. Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family. | 0.926 |
SEH67575.1 | SEH66790.1 | SAMN04488075_0726 | SAMN04488075_0679 | Glyoxylate reductase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | Phosphoglycolate phosphatase. | 0.906 |
SEH67575.1 | SEH79964.1 | SAMN04488075_0726 | SAMN04488075_1131 | Glyoxylate reductase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase. | 0.910 |
SEH67575.1 | SEH80044.1 | SAMN04488075_0726 | SAMN04488075_1136 | Glyoxylate reductase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | Lactate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.914 |
SEH67575.1 | SEH89129.1 | SAMN04488075_0726 | SAMN04488075_1656 | Glyoxylate reductase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | Glycolate oxidase. | 0.917 |
SEH67575.1 | SEH89142.1 | SAMN04488075_0726 | SAMN04488075_1657 | Glyoxylate reductase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | Glycolate oxidase FAD binding subunit. | 0.917 |
SEH67575.1 | SEH89159.1 | SAMN04488075_0726 | SAMN04488075_1658 | Glyoxylate reductase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | Glycolate oxidase iron-sulfur subunit. | 0.913 |
SEH67575.1 | SEH89196.1 | SAMN04488075_0726 | SAMN04488075_1660 | Glyoxylate reductase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | Serine-glyoxylate aminotransferase apoenzyme. | 0.921 |
SEH67575.1 | SEH99098.1 | SAMN04488075_0726 | SAMN04488075_2126 | Glyoxylate reductase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | Phosphoglycolate phosphatase. | 0.906 |
SEH67575.1 | SEI07419.1 | SAMN04488075_0726 | SAMN04488075_2633 | Glyoxylate reductase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | Phosphoglycolate phosphatase; Specifically catalyzes the dephosphorylation of 2- phosphoglycolate. Is involved in the dissimilation of the intracellular 2-phosphoglycolate formed during the DNA repair of 3'-phosphoglycolate ends, a major class of DNA lesions induced by oxidative stress. Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family. | 0.906 |
SEH67575.1 | glcB | SAMN04488075_0726 | SAMN04488075_2461 | Glyoxylate reductase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | Malate synthase; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily. | 0.914 |
SEH79964.1 | SEH67575.1 | SAMN04488075_1131 | SAMN04488075_0726 | 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase. | Glyoxylate reductase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.910 |
SEH79964.1 | SEH80044.1 | SAMN04488075_1131 | SAMN04488075_1136 | 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase. | Lactate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.910 |
SEH79964.1 | SEH89129.1 | SAMN04488075_1131 | SAMN04488075_1656 | 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase. | Glycolate oxidase. | 0.910 |
SEH79964.1 | SEH89142.1 | SAMN04488075_1131 | SAMN04488075_1657 | 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase. | Glycolate oxidase FAD binding subunit. | 0.907 |
SEH79964.1 | SEH89159.1 | SAMN04488075_1131 | SAMN04488075_1658 | 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase. | Glycolate oxidase iron-sulfur subunit. | 0.909 |
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