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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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experimentally determined
co-expression
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gene fusions
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[Homology]
Score
SEH89249.1Ornithine cyclodeaminase. (333 aa)    
Predicted Functional Partners:
SEH89215.1
Threonine dehydratase.
 
  
 0.987
SEH89196.1
Serine-glyoxylate aminotransferase apoenzyme.
 
  
  0.980
SEH89233.1
D-3-hydroxyaspartate aldolase.
 
   
 0.926
SEH60462.1
Arginase; Belongs to the arginase family.
    
 0.882
SEH91261.1
L-proline dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.
  
 
 0.782
ilvA
L-threonine ammonia-lyase; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA.
 
  
 0.689
SEI02525.1
Proline racemase; Belongs to the proline racemase family.
 
  
 0.675
SEI08047.1
Ornithine cyclodeaminase.
  
  
 
0.649
SEH95612.1
Ornithine decarboxylase; Belongs to the Orn/Lys/Arg decarboxylase class-II family.
  
 
 0.645
SEI02551.1
4-hydroxyproline epimerase; Belongs to the proline racemase family.
    
 0.626
Your Current Organism:
Paracoccus alkenifer
NCBI taxonomy Id: 65735
Other names: CIP 105684, DSM 11593, P. alkenifer, strain A901/1
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