Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEH69057.1 | SEH69150.1 | SAMN04488075_0803 | SAMN04488075_0807 | Isochorismate synthase. | 2,3-dihydroxybenzoate-AMP ligase. | 0.987 |
SEH69057.1 | SEH82081.1 | SAMN04488075_0803 | SAMN04488075_1254 | Isochorismate synthase. | Prephenate dehydrogenase. | 0.826 |
SEH69057.1 | SEH98703.1 | SAMN04488075_0803 | SAMN04488075_2094 | Isochorismate synthase. | Isochorismate pyruvate lyase. | 0.983 |
SEH69057.1 | aroA | SAMN04488075_0803 | SAMN04488075_1519 | Isochorismate synthase. | 3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | 0.552 |
SEH69057.1 | aroC | SAMN04488075_0803 | SAMN04488075_0590 | Isochorismate synthase. | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | 0.867 |
SEH69150.1 | SEH69057.1 | SAMN04488075_0807 | SAMN04488075_0803 | 2,3-dihydroxybenzoate-AMP ligase. | Isochorismate synthase. | 0.987 |
SEH69150.1 | SEH98703.1 | SAMN04488075_0807 | SAMN04488075_2094 | 2,3-dihydroxybenzoate-AMP ligase. | Isochorismate pyruvate lyase. | 0.888 |
SEH82081.1 | SEH69057.1 | SAMN04488075_1254 | SAMN04488075_0803 | Prephenate dehydrogenase. | Isochorismate synthase. | 0.826 |
SEH82081.1 | SEH98703.1 | SAMN04488075_1254 | SAMN04488075_2094 | Prephenate dehydrogenase. | Isochorismate pyruvate lyase. | 0.778 |
SEH82081.1 | aroA | SAMN04488075_1254 | SAMN04488075_1519 | Prephenate dehydrogenase. | 3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | 0.991 |
SEH82081.1 | aroC | SAMN04488075_1254 | SAMN04488075_0590 | Prephenate dehydrogenase. | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | 0.934 |
SEH98703.1 | SEH69057.1 | SAMN04488075_2094 | SAMN04488075_0803 | Isochorismate pyruvate lyase. | Isochorismate synthase. | 0.983 |
SEH98703.1 | SEH69150.1 | SAMN04488075_2094 | SAMN04488075_0807 | Isochorismate pyruvate lyase. | 2,3-dihydroxybenzoate-AMP ligase. | 0.888 |
SEH98703.1 | SEH82081.1 | SAMN04488075_2094 | SAMN04488075_1254 | Isochorismate pyruvate lyase. | Prephenate dehydrogenase. | 0.778 |
SEH98703.1 | SEI09833.1 | SAMN04488075_2094 | SAMN04488075_2827 | Isochorismate pyruvate lyase. | 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase. | 0.932 |
SEH98703.1 | aroA | SAMN04488075_2094 | SAMN04488075_1519 | Isochorismate pyruvate lyase. | 3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | 0.866 |
SEH98703.1 | aroC | SAMN04488075_2094 | SAMN04488075_0590 | Isochorismate pyruvate lyase. | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | 0.819 |
SEH98703.1 | folD | SAMN04488075_2094 | SAMN04488075_2093 | Isochorismate pyruvate lyase. | Methylenetetrahydrofolate dehydrogenase (NADP+); Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate. | 0.858 |
SEH98703.1 | rplV | SAMN04488075_2094 | SAMN04488075_2157 | Isochorismate pyruvate lyase. | Large subunit ribosomal protein L22; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome. | 0.780 |
SEH98703.1 | rpmC | SAMN04488075_2094 | SAMN04488075_2154 | Isochorismate pyruvate lyase. | Large subunit ribosomal protein L29; Belongs to the universal ribosomal protein uL29 family. | 0.809 |
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