Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEH81743.1 | SEI08849.1 | SAMN04488075_1235 | SAMN04488075_2783 | HlyD family secretion protein. | Drug resistance transporter, EmrB/QacA subfamily. | 0.417 |
SEH81743.1 | macB | SAMN04488075_1235 | SAMN04488075_2167 | HlyD family secretion protein. | Macrolide transport system ATP-binding/permease protein; Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides. | 0.931 |
SEH87313.1 | SEI08849.1 | SAMN04488075_1551 | SAMN04488075_2783 | Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | Drug resistance transporter, EmrB/QacA subfamily. | 0.541 |
SEH90165.1 | SEI08849.1 | SAMN04488075_1717 | SAMN04488075_2783 | Membrane protein DedA, SNARE-associated domain. | Drug resistance transporter, EmrB/QacA subfamily. | 0.402 |
SEI08841.1 | SEI08849.1 | SAMN04488075_2782 | SAMN04488075_2783 | NAD(P)H-dependent FMN reductase. | Drug resistance transporter, EmrB/QacA subfamily. | 0.519 |
SEI08849.1 | SEH81743.1 | SAMN04488075_2783 | SAMN04488075_1235 | Drug resistance transporter, EmrB/QacA subfamily. | HlyD family secretion protein. | 0.417 |
SEI08849.1 | SEH87313.1 | SAMN04488075_2783 | SAMN04488075_1551 | Drug resistance transporter, EmrB/QacA subfamily. | Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 0.541 |
SEI08849.1 | SEH90165.1 | SAMN04488075_2783 | SAMN04488075_1717 | Drug resistance transporter, EmrB/QacA subfamily. | Membrane protein DedA, SNARE-associated domain. | 0.402 |
SEI08849.1 | SEI08841.1 | SAMN04488075_2783 | SAMN04488075_2782 | Drug resistance transporter, EmrB/QacA subfamily. | NAD(P)H-dependent FMN reductase. | 0.519 |
SEI08849.1 | macB | SAMN04488075_2783 | SAMN04488075_2167 | Drug resistance transporter, EmrB/QacA subfamily. | Macrolide transport system ATP-binding/permease protein; Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides. | 0.443 |
macB | SEH81743.1 | SAMN04488075_2167 | SAMN04488075_1235 | Macrolide transport system ATP-binding/permease protein; Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides. | HlyD family secretion protein. | 0.931 |
macB | SEI08849.1 | SAMN04488075_2167 | SAMN04488075_2783 | Macrolide transport system ATP-binding/permease protein; Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides. | Drug resistance transporter, EmrB/QacA subfamily. | 0.443 |