STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEI10251.1Hypothetical protein. (611 aa)    
Predicted Functional Partners:
SEI10242.1
Hypothetical protein.
       0.773
SEI10260.1
Hypothetical protein.
       0.773
SEI10269.1
Hypothetical protein.
       0.773
SEI10278.1
Hypothetical protein.
       0.578
SEI10290.1
Hypothetical protein.
       0.578
SEI10231.1
Predicted RNA binding protein YcfA, dsRBD-like fold, HicA-like mRNA interferase family; Manually curated.
       0.533
SEI10300.1
Hypothetical protein.
       0.530
SEI10223.1
Predicted nuclease of the RNAse H fold, HicB family.
       0.438
Your Current Organism:
Paracoccus alkenifer
NCBI taxonomy Id: 65735
Other names: CIP 105684, DSM 11593, P. alkenifer, strain A901/1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.