STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OHV12793.1Plasmid stabilization protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (80 aa)    
Predicted Functional Partners:
vapC
VapC toxin family PIN domain ribonuclease; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family.
 
 
 
 0.990
OHV12792.1
DNA methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.499
OHV13101.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.499
OHV08726.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
      
 0.418
OHV08660.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.400
Your Current Organism:
Kushneria sp. YCWA18
NCBI taxonomy Id: 657387
Other names: K. sp. YCWA18
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