STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
phnIalpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnI. (362 aa)    
Predicted Functional Partners:
phnL
alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnL.
 
 0.999
phnK
Putative phosphonate transport system ATP-binding protein.
 
 
 0.999
phnJ
alpha-D-ribose 1-methylphosphonate 5-phosphate C-P lyase; Catalyzes the breakage of the C-P bond in alpha-D-ribose 1- methylphosphonate 5-phosphate (PRPn) forming alpha-D-ribose. Belongs to the PhnJ family.
 
 
 0.999
phnH
alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnH.
 
 0.999
phnG
alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnG.
 
 0.999
phnM
alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase.
 
 
 0.995
phnF
Transcriptional regulator, GntR family.
 
  
 0.985
phnN
Ribose 1,5-bisphosphokinase; Catalyzes the phosphorylation of ribose 1,5-bisphosphate to 5-phospho-D-ribosyl alpha-1-diphosphate (PRPP).
 
  
 0.977
phnD_2
Phosphonate transport system substrate-binding protein.
 
  
 0.940
phnC_2
Phosphonate transport system ATP-binding protein; Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphonates importer (TC 3.A.1.9.1) family.
 
  
 0.868
Your Current Organism:
Pacificibacter marinus
NCBI taxonomy Id: 658057
Other names: CCUG 58403, DSM 25228, KCTC 22805, P. marinus, Pacificibacter marinus (Jung et al. 2011) Park et al. 2015, Roseovarius marinus, Roseovarius marinus Jung et al. 2011, Roseovarius sp. HDW-9, strain HDW-9
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