STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGN45516.1Hypothetical protein. (226 aa)    
Predicted Functional Partners:
EGN45515.1
Hypothetical protein.
 
     0.839
EGN45517.1
Hypothetical protein.
       0.779
EGN45513.1
DNA helicase II/ATP-dependent DNA helicase PcrA.
       0.500
EGN45514.1
Hypothetical protein.
       0.500
EGN40866.1
Hypothetical protein.
  
     0.486
EGN40068.1
Hypothetical protein.
    
  0.473
argH
Argininosuccinate lyase.
    
  0.468
EGN47494.1
Hydrolyase, tartrate alpha subunit/fumarate domain-containing protein, Fe-S type.
     
 0.433
EGN40055.1
Hypothetical protein.
  
     0.423
EGN40775.1
Thiamine biosynthesis lipoprotein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein.
 
  
 0.418
Your Current Organism:
Lachnospiraceae bacterium 3157FAACT1
NCBI taxonomy Id: 658086
Other names: L. bacterium 3_1_57FAA_CT1, Lachnospiraceae bacterium 3_1_57FAA_CT1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.