STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGN43405.1GntR family transcriptional regulator. (132 aa)    
Predicted Functional Partners:
EGN43406.1
ABC transporter ATP-binding protein.
 
    0.951
EGN43407.1
Hypothetical protein.
  
    0.797
EGN33767.1
Hypothetical protein.
 
    0.783
EGN43310.1
ABC transporter ATP-binding protein.
 
    0.776
EGN34478.1
ABC transporter ATP-binding protein.
 
    0.755
EGN43398.1
Hypothetical protein.
  
     0.754
EGN43408.1
Hypothetical protein.
       0.746
EGN43400.1
Hypothetical protein.
  
  
 0.601
EGN35826.1
GntR family transcriptional regulator/MocR family aminotransferase.
  
     0.453
Your Current Organism:
Lachnospiraceae bacterium 3157FAACT1
NCBI taxonomy Id: 658086
Other names: L. bacterium 3_1_57FAA_CT1, Lachnospiraceae bacterium 3_1_57FAA_CT1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.