Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EGN35060.1 | EGN39426.1 | HMPREF0994_04613 | HMPREF0994_03517 | Hypothetical protein. | Diguanylate cyclase (GGDEF) domain-containing protein. | 0.997 |
EGN35060.1 | EGN41157.1 | HMPREF0994_04613 | HMPREF0994_02250 | Hypothetical protein. | GMP synthase (glutamine-hydrolyzing) domain-containing protein. | 0.518 |
EGN35060.1 | EGN41469.1 | HMPREF0994_04613 | HMPREF0994_02064 | Hypothetical protein. | PAS domain S-box protein. | 0.998 |
EGN35060.1 | EGN41972.1 | HMPREF0994_04613 | HMPREF0994_01498 | Hypothetical protein. | PAS domain S-box protein. | 0.998 |
EGN35060.1 | EGN42608.1 | HMPREF0994_04613 | HMPREF0994_01207 | Hypothetical protein. | Hypothetical protein. | 0.746 |
EGN35060.1 | EGN42736.1 | HMPREF0994_04613 | HMPREF0994_00119 | Hypothetical protein. | Diguanylate cyclase (GGDEF) domain-containing protein. | 0.997 |
EGN35060.1 | cinA | HMPREF0994_04613 | HMPREF0994_03092 | Hypothetical protein. | Competence/damage-inducible protein CinA domain; Belongs to the CinA family. | 0.404 |
EGN35060.1 | guaA | HMPREF0994_04613 | HMPREF0994_01855 | Hypothetical protein. | GMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP. | 0.518 |
EGN35060.1 | guaB | HMPREF0994_04613 | HMPREF0994_04535 | Hypothetical protein. | Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.615 |
EGN39426.1 | EGN35060.1 | HMPREF0994_03517 | HMPREF0994_04613 | Diguanylate cyclase (GGDEF) domain-containing protein. | Hypothetical protein. | 0.997 |
EGN39426.1 | EGN41157.1 | HMPREF0994_03517 | HMPREF0994_02250 | Diguanylate cyclase (GGDEF) domain-containing protein. | GMP synthase (glutamine-hydrolyzing) domain-containing protein. | 0.921 |
EGN39426.1 | EGN41469.1 | HMPREF0994_03517 | HMPREF0994_02064 | Diguanylate cyclase (GGDEF) domain-containing protein. | PAS domain S-box protein. | 0.997 |
EGN39426.1 | EGN41972.1 | HMPREF0994_03517 | HMPREF0994_01498 | Diguanylate cyclase (GGDEF) domain-containing protein. | PAS domain S-box protein. | 0.997 |
EGN39426.1 | EGN42608.1 | HMPREF0994_03517 | HMPREF0994_01207 | Diguanylate cyclase (GGDEF) domain-containing protein. | Hypothetical protein. | 0.617 |
EGN39426.1 | EGN42736.1 | HMPREF0994_03517 | HMPREF0994_00119 | Diguanylate cyclase (GGDEF) domain-containing protein. | Diguanylate cyclase (GGDEF) domain-containing protein. | 0.993 |
EGN39426.1 | guaA | HMPREF0994_03517 | HMPREF0994_01855 | Diguanylate cyclase (GGDEF) domain-containing protein. | GMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP. | 0.921 |
EGN39426.1 | guaB | HMPREF0994_03517 | HMPREF0994_04535 | Diguanylate cyclase (GGDEF) domain-containing protein. | Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.830 |
EGN41157.1 | EGN35060.1 | HMPREF0994_02250 | HMPREF0994_04613 | GMP synthase (glutamine-hydrolyzing) domain-containing protein. | Hypothetical protein. | 0.518 |
EGN41157.1 | EGN39426.1 | HMPREF0994_02250 | HMPREF0994_03517 | GMP synthase (glutamine-hydrolyzing) domain-containing protein. | Diguanylate cyclase (GGDEF) domain-containing protein. | 0.921 |
EGN41157.1 | EGN41469.1 | HMPREF0994_02250 | HMPREF0994_02064 | GMP synthase (glutamine-hydrolyzing) domain-containing protein. | PAS domain S-box protein. | 0.528 |
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