STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGN41056.1Hypothetical protein. (481 aa)    
Predicted Functional Partners:
EGN40650.1
Anaerobic sulfatase maturase.
 
   0.902
EGN41057.1
Hypothetical protein.
       0.773
EGN41055.1
Hypothetical protein.
   
  0.766
EGN42711.1
SCIFF radical SAM maturase.
  
   0.689
EGN41058.1
Hypothetical protein.
       0.578
EGN41061.1
Hypothetical protein.
 
    
0.568
EGN40914.1
Hypothetical protein.
  
     0.524
EGN41059.1
Multiple sugar transport system permease.
       0.495
EGN41060.1
Multiple sugar transport system permease.
       0.474
EGN30202.2
Hypothetical protein.
  
 
  0.409
Your Current Organism:
Lachnospiraceae bacterium 3157FAACT1
NCBI taxonomy Id: 658086
Other names: L. bacterium 3_1_57FAA_CT1, Lachnospiraceae bacterium 3_1_57FAA_CT1
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.