STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGN40590.1Hypothetical protein; Belongs to the glycosyl hydrolase 43 family. (317 aa)    
Predicted Functional Partners:
EGN40588.2
Hypothetical protein.
  
    0.724
EGN40589.1
Hypothetical protein.
  
    0.717
EGN47285.1
Hypothetical protein; Belongs to the glycosyl hydrolase 43 family.
 
   
 0.665
EGN46348.1
Hypothetical protein.
 
     0.642
EGN36022.1
Hypothetical protein.
 
     0.629
EGN41273.1
Hypothetical protein; Belongs to the glycosyl hydrolase 2 family.
 
     0.595
EGN35781.1
Hypothetical protein; Belongs to the glycosyl hydrolase 2 family.
 
     0.583
EPC05084.1
alpha-N-arabinofuranosidase.
 
     0.572
EGN40587.1
Hypothetical protein.
 
    0.569
EGN39016.1
alpha-N-arabinofuranosidase.
 
     0.561
Your Current Organism:
Lachnospiraceae bacterium 3157FAACT1
NCBI taxonomy Id: 658086
Other names: L. bacterium 3_1_57FAA_CT1, Lachnospiraceae bacterium 3_1_57FAA_CT1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.