Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EGN39005.1Multiple sugar transport system permease; Overlaps another CDS with the same product name. (310 aa)    
Predicted Functional Partners:
EGN39004.1
Multiple sugar transport system permease; Overlaps another CDS with the same product name.
 
  0.960
EGN39006.1
Hypothetical protein.
 
  0.929
EGN38759.1
Hypothetical protein.
  
  0.849
EGN32418.1
Hypothetical protein.
 
  0.836
EGN46345.1
Multiple sugar transport system substrate-binding protein.
  
  0.834
EGN42878.1
Hypothetical protein.
  
  0.832
EGN39234.1
Hypothetical protein.
 
  0.831
EGN35771.1
Multiple sugar transport system permease.
  
  0.830
EGN30682.1
Multiple sugar transport system permease.
  
  0.827
EGN44831.1
Hypothetical protein.
  
  0.825
Your Current Organism:
Lachnospiraceae bacterium 3157FAACT1
NCBI taxonomy Id: 658086
Other names: L. bacterium 3_1_57FAA_CT1, Lachnospiraceae bacterium 3_1_57FAA_CT1
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