STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGN34219.1Prepilin-type N-terminal cleavage/methylation domain-containing protein. (285 aa)    
Predicted Functional Partners:
EGN34206.1
Type IV pilus assembly protein PilB.
 
 0.919
EGN34209.1
Hypothetical protein.
 
  
 0.877
EPC05162.1
Prepilin-type N-terminal cleavage/methylation domain-containing protein.
 
     0.763
EGN32835.1
Prepilin-type N-terminal cleavage/methylation domain-containing protein.
 
  
 
0.736
EGN34210.1
Hypothetical protein.
 
  
 0.690
EGN34214.1
Prepilin-type N-terminal cleavage/methylation domain-containing protein.
       0.634
EGN34215.1
Hypothetical protein.
       0.634
EGN34216.1
Hypothetical protein.
       0.634
rimO
Ribosomal protein S12 methylthiotransferase RimO; Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12; Belongs to the methylthiotransferase family. RimO subfamily.
   
    0.575
EGN32280.1
Hypothetical protein.
  
     0.528
Your Current Organism:
Lachnospiraceae bacterium 3157FAACT1
NCBI taxonomy Id: 658086
Other names: L. bacterium 3_1_57FAA_CT1, Lachnospiraceae bacterium 3_1_57FAA_CT1
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.