STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGN30220.1Hypothetical protein. (279 aa)    
Predicted Functional Partners:
EGN30221.1
Hypothetical protein.
   0.961
EGN30211.1
Hypothetical protein.
  
  
 
0.926
EGN44084.1
Hypothetical protein.
  
   0.833
EGN41509.1
Hypothetical protein.
 
   0.829
EGN41309.1
Hypothetical protein.
  
   0.828
EGN40984.1
Hypothetical protein.
 
   0.822
EGN39233.1
Multiple sugar transport system permease.
 
   0.816
EGN39985.1
Hypothetical protein.
  
   0.814
EGN42373.1
Hypothetical protein.
  
   0.813
EGN31469.1
Multiple sugar transport system permease; Overlaps another CDS with the same product name.
 
   0.813
Your Current Organism:
Lachnospiraceae bacterium 3157FAACT1
NCBI taxonomy Id: 658086
Other names: L. bacterium 3_1_57FAA_CT1, Lachnospiraceae bacterium 3_1_57FAA_CT1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.