Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHG83882.1 | SHG83932.1 | SAMN04488135_101394 | SAMN04488135_101395 | Hypothetical protein. | Prepilin-type N-terminal cleavage/methylation domain-containing protein. | 0.827 |
SHG83882.1 | SHG83978.1 | SAMN04488135_101394 | SAMN04488135_101396 | Hypothetical protein. | Hypothetical protein. | 0.746 |
SHG83882.1 | SHG84028.1 | SAMN04488135_101394 | SAMN04488135_101397 | Hypothetical protein. | Type II/IV secretion system protein. | 0.686 |
SHG83882.1 | SHG84075.1 | SAMN04488135_101394 | SAMN04488135_101398 | Hypothetical protein. | Hypothetical protein. | 0.685 |
SHG83882.1 | SHG84117.1 | SAMN04488135_101394 | SAMN04488135_101399 | Hypothetical protein. | Hypothetical protein. | 0.693 |
SHG83882.1 | SHG84165.1 | SAMN04488135_101394 | SAMN04488135_101400 | Hypothetical protein. | Type IVB pilus formation outer membrane protein, R64 PilN family. | 0.698 |
SHG83882.1 | SHG84202.1 | SAMN04488135_101394 | SAMN04488135_101401 | Hypothetical protein. | Conjugal transfer protein. | 0.699 |
SHG83882.1 | SHI12317.1 | SAMN04488135_101394 | SAMN04488135_109168 | Hypothetical protein. | Autotransporter-associated beta strand repeat-containing protein. | 0.557 |
SHG83882.1 | SHI21316.1 | SAMN04488135_101394 | SAMN04488135_113105 | Hypothetical protein. | acyl-CoA thioesterase-1. | 0.707 |
SHG83882.1 | guaA | SAMN04488135_101394 | SAMN04488135_10914 | Hypothetical protein. | GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP. | 0.573 |
SHG83932.1 | SHG83882.1 | SAMN04488135_101395 | SAMN04488135_101394 | Prepilin-type N-terminal cleavage/methylation domain-containing protein. | Hypothetical protein. | 0.827 |
SHG83932.1 | SHG83978.1 | SAMN04488135_101395 | SAMN04488135_101396 | Prepilin-type N-terminal cleavage/methylation domain-containing protein. | Hypothetical protein. | 0.866 |
SHG83932.1 | SHG84028.1 | SAMN04488135_101395 | SAMN04488135_101397 | Prepilin-type N-terminal cleavage/methylation domain-containing protein. | Type II/IV secretion system protein. | 0.899 |
SHG83932.1 | SHG84075.1 | SAMN04488135_101395 | SAMN04488135_101398 | Prepilin-type N-terminal cleavage/methylation domain-containing protein. | Hypothetical protein. | 0.686 |
SHG83932.1 | SHG84117.1 | SAMN04488135_101395 | SAMN04488135_101399 | Prepilin-type N-terminal cleavage/methylation domain-containing protein. | Hypothetical protein. | 0.704 |
SHG83932.1 | SHG84165.1 | SAMN04488135_101395 | SAMN04488135_101400 | Prepilin-type N-terminal cleavage/methylation domain-containing protein. | Type IVB pilus formation outer membrane protein, R64 PilN family. | 0.701 |
SHG83932.1 | SHG84202.1 | SAMN04488135_101395 | SAMN04488135_101401 | Prepilin-type N-terminal cleavage/methylation domain-containing protein. | Conjugal transfer protein. | 0.693 |
SHG83978.1 | SHG83882.1 | SAMN04488135_101396 | SAMN04488135_101394 | Hypothetical protein. | Hypothetical protein. | 0.746 |
SHG83978.1 | SHG83932.1 | SAMN04488135_101396 | SAMN04488135_101395 | Hypothetical protein. | Prepilin-type N-terminal cleavage/methylation domain-containing protein. | 0.866 |
SHG83978.1 | SHG84028.1 | SAMN04488135_101396 | SAMN04488135_101397 | Hypothetical protein. | Type II/IV secretion system protein. | 0.954 |
page 1 of 4