STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHG92976.1Type II secretion system protein I (GspI). (123 aa)    
Predicted Functional Partners:
SHG93078.1
General secretion pathway protein K.
 
 
 0.996
SHG93028.1
General secretion pathway protein J.
 
 0.987
SHI47010.1
Type II secretion system protein K (GspK).
 
 
 0.984
SHG92932.1
General secretion pathway protein H.
 
  
 0.962
SHG92882.1
General secretion pathway protein G.
 
  
 0.958
SHG93219.1
Type II secretion system protein N (GspN).
 
   
 0.945
SHG93122.1
Type II secretion system protein L (GspL).
 
  
 0.934
SHG93266.1
Type II secretion system protein D (GspD).
 
  
 0.932
SHG93313.1
General secretion pathway protein E; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.
 
 0.930
SHG93360.1
Type II secretion system protein F (GspF).
 
  
 0.928
Your Current Organism:
Candidimonas bauzanensis
NCBI taxonomy Id: 658167
Other names: Alcaligenaceae bacterium BZ59, C. bauzanensis, CGMCC 1.10190, Candidimonas bauzanensis Zhang et al. 2012, DSM 22805, LMG 26046, LMG:26046, strain BZ59
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.