Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHH03709.1 | SHH03750.1 | SAMN04488135_10216 | SAMN04488135_10217 | Transcriptional regulator, MarR family. | D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.697 |
SHH03709.1 | SHH03787.1 | SAMN04488135_10216 | SAMN04488135_10218 | Transcriptional regulator, MarR family. | Methyl-accepting chemotaxis protein. | 0.482 |
SHH03709.1 | SHH09357.1 | SAMN04488135_10216 | SAMN04488135_102164 | Transcriptional regulator, MarR family. | Transcriptional regulator, TetR family. | 0.465 |
SHH03709.1 | SHI22839.1 | SAMN04488135_10216 | SAMN04488135_11481 | Transcriptional regulator, MarR family. | Predicted dithiol-disulfide oxidoreductase, DUF899 family. | 0.548 |
SHH03709.1 | SHI24358.1 | SAMN04488135_10216 | SAMN04488135_11574 | Transcriptional regulator, MarR family. | Hypothetical protein. | 0.534 |
SHH03709.1 | SHI24372.1 | SAMN04488135_10216 | SAMN04488135_11575 | Transcriptional regulator, MarR family. | Hypothetical protein. | 0.487 |
SHH03750.1 | SHH03709.1 | SAMN04488135_10217 | SAMN04488135_10216 | D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | Transcriptional regulator, MarR family. | 0.697 |
SHH03750.1 | SHH03787.1 | SAMN04488135_10217 | SAMN04488135_10218 | D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | Methyl-accepting chemotaxis protein. | 0.529 |
SHH03787.1 | SHH03709.1 | SAMN04488135_10218 | SAMN04488135_10216 | Methyl-accepting chemotaxis protein. | Transcriptional regulator, MarR family. | 0.482 |
SHH03787.1 | SHH03750.1 | SAMN04488135_10218 | SAMN04488135_10217 | Methyl-accepting chemotaxis protein. | D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.529 |
SHH09357.1 | SHH03709.1 | SAMN04488135_102164 | SAMN04488135_10216 | Transcriptional regulator, TetR family. | Transcriptional regulator, MarR family. | 0.465 |
SHI22839.1 | SHH03709.1 | SAMN04488135_11481 | SAMN04488135_10216 | Predicted dithiol-disulfide oxidoreductase, DUF899 family. | Transcriptional regulator, MarR family. | 0.548 |
SHI22839.1 | SHI24358.1 | SAMN04488135_11481 | SAMN04488135_11574 | Predicted dithiol-disulfide oxidoreductase, DUF899 family. | Hypothetical protein. | 0.707 |
SHI22839.1 | SHI24372.1 | SAMN04488135_11481 | SAMN04488135_11575 | Predicted dithiol-disulfide oxidoreductase, DUF899 family. | Hypothetical protein. | 0.682 |
SHI24358.1 | SHH03709.1 | SAMN04488135_11574 | SAMN04488135_10216 | Hypothetical protein. | Transcriptional regulator, MarR family. | 0.534 |
SHI24358.1 | SHI22839.1 | SAMN04488135_11574 | SAMN04488135_11481 | Hypothetical protein. | Predicted dithiol-disulfide oxidoreductase, DUF899 family. | 0.707 |
SHI24358.1 | SHI24372.1 | SAMN04488135_11574 | SAMN04488135_11575 | Hypothetical protein. | Hypothetical protein. | 0.925 |
SHI24372.1 | SHH03709.1 | SAMN04488135_11575 | SAMN04488135_10216 | Hypothetical protein. | Transcriptional regulator, MarR family. | 0.487 |
SHI24372.1 | SHI22839.1 | SAMN04488135_11575 | SAMN04488135_11481 | Hypothetical protein. | Predicted dithiol-disulfide oxidoreductase, DUF899 family. | 0.682 |
SHI24372.1 | SHI24358.1 | SAMN04488135_11575 | SAMN04488135_11574 | Hypothetical protein. | Hypothetical protein. | 0.925 |