STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHH10078.1Enoyl-CoA hydratase/carnithine racemase. (239 aa)    
Predicted Functional Partners:
SHH39431.1
PAS domain S-box-containing protein.
    
 0.945
SHH67672.1
Enoyl-CoA hydratase.
  
  0.929
SHG85811.1
Enoyl-CoA hydratase.
  
  0.906
SHH92591.1
glutaryl-CoA dehydrogenase.
  
  0.877
SHH36706.1
Short chain enoyl-CoA hydratase.
  
  0.848
SHI32017.1
trans-feruloyl-CoA hydratase / vanillin synthase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
  0.847
SHH81414.1
Amino acid adenylation domain-containing protein.
  
 0.846
SHH95139.1
Short chain enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
  0.845
SHH71842.1
3-methylcrotonyl-CoA carboxylase alpha subunit.
  
 0.828
SHH71814.1
3-methylcrotonyl-CoA carboxylase beta subunit.
  
 
 0.817
Your Current Organism:
Candidimonas bauzanensis
NCBI taxonomy Id: 658167
Other names: Alcaligenaceae bacterium BZ59, C. bauzanensis, CGMCC 1.10190, Candidimonas bauzanensis Zhang et al. 2012, DSM 22805, LMG 26046, LMG:26046, strain BZ59
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