STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHH18515.1Tripartite-type tricarboxylate transporter, receptor component TctC. (325 aa)    
Predicted Functional Partners:
SHH15686.1
Tripartite tricarboxylate transporter TctA family protein.
 
    0.797
SHI23808.1
TctA family transporter.
 
    0.795
SHG89206.1
TctA family transporter.
 
    0.788
SHG92212.1
Putative tricarboxylic transport membrane protein.
 
    0.689
SHG88517.1
TctA family transporter.
 
    0.653
SHH18480.1
Asp/Glu/hydantoin racemase.
       0.631
SHG89250.1
Tripartite tricarboxylate transporter TctB family protein.
  
    0.576
SHH15726.1
Tripartite tricarboxylate transporter TctB family protein.
  
    0.533
SHH18552.1
Tripartite-type tricarboxylate transporter, receptor component TctC.
 
    
0.531
SHI23794.1
Tripartite tricarboxylate transporter TctB family protein.
  
    0.495
Your Current Organism:
Candidimonas bauzanensis
NCBI taxonomy Id: 658167
Other names: Alcaligenaceae bacterium BZ59, C. bauzanensis, CGMCC 1.10190, Candidimonas bauzanensis Zhang et al. 2012, DSM 22805, LMG 26046, LMG:26046, strain BZ59
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