STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHH35695.1Citrate lyase subunit beta / citryl-CoA lyase; Belongs to the HpcH/HpaI aldolase family. (299 aa)    
Predicted Functional Partners:
SHI07988.1
Acyl dehydratase.
 
 
 0.912
SHI14998.1
itaconyl-CoA hydratase / mesaconyl-C4 CoA hydratase.
  
 
 0.837
SHH35740.1
Enoyl-CoA hydratase/isomerase.
    
  0.789
SHI15065.1
Fumarase, class I, homodimeric; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
    
 0.768
SHI28995.1
Citrate lyase subunit beta / citryl-CoA lyase; Belongs to the HpcH/HpaI aldolase family.
  
  
 
0.760
SHH16161.1
Regulator of RNase E activity RraA.
    
  0.680
SHG74825.1
Malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+).
  
 
 0.645
SHI15269.1
Malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+).
  
 
 0.645
SHI26139.1
Malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+).
  
 
 0.645
mdh
Malate dehydrogenase (NAD); Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 2 family.
  
 
 0.623
Your Current Organism:
Candidimonas bauzanensis
NCBI taxonomy Id: 658167
Other names: Alcaligenaceae bacterium BZ59, C. bauzanensis, CGMCC 1.10190, Candidimonas bauzanensis Zhang et al. 2012, DSM 22805, LMG 26046, LMG:26046, strain BZ59
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