Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHH20557.1 | SHH36619.1 | SAMN04488135_102453 | SAMN04488135_10351 | Acetyl-CoA acetyltransferase. | Short chain enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.989 |
SHH20557.1 | SHH51267.1 | SAMN04488135_102453 | SAMN04488135_103409 | Acetyl-CoA acetyltransferase. | Hypothetical protein. | 0.746 |
SHH20901.1 | SHH36619.1 | SAMN04488135_102461 | SAMN04488135_10351 | Acetyl-CoA acetyltransferase. | Short chain enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.989 |
SHH20901.1 | SHH51267.1 | SAMN04488135_102461 | SAMN04488135_103409 | Acetyl-CoA acetyltransferase. | Hypothetical protein. | 0.736 |
SHH36571.1 | SHH36619.1 | SAMN04488135_10350 | SAMN04488135_10351 | acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | Short chain enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.999 |
SHH36571.1 | SHH68543.1 | SAMN04488135_10350 | SAMN04488135_104178 | acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | acetyl-CoA acyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | 0.713 |
SHH36571.1 | SHH71790.1 | SAMN04488135_10350 | SAMN04488135_104294 | acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | 0.815 |
SHH36571.1 | SHI03626.1 | SAMN04488135_10350 | SAMN04488135_107159 | acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | acetyl-CoA acyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | 0.740 |
SHH36571.1 | SHI21555.1 | SAMN04488135_10350 | SAMN04488135_113129 | acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | 0.810 |
SHH36571.1 | SHI45199.1 | SAMN04488135_10350 | SAMN04488135_12429 | acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | 0.800 |
SHH36619.1 | SHH20557.1 | SAMN04488135_10351 | SAMN04488135_102453 | Short chain enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. | Acetyl-CoA acetyltransferase. | 0.989 |
SHH36619.1 | SHH20901.1 | SAMN04488135_10351 | SAMN04488135_102461 | Short chain enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. | Acetyl-CoA acetyltransferase. | 0.989 |
SHH36619.1 | SHH36571.1 | SAMN04488135_10351 | SAMN04488135_10350 | Short chain enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. | acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | 0.999 |
SHH36619.1 | SHH51267.1 | SAMN04488135_10351 | SAMN04488135_103409 | Short chain enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. | Hypothetical protein. | 0.989 |
SHH36619.1 | SHH65774.1 | SAMN04488135_10351 | SAMN04488135_10493 | Short chain enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. | Acetyl-CoA acetyltransferase. | 0.989 |
SHH36619.1 | SHH68543.1 | SAMN04488135_10351 | SAMN04488135_104178 | Short chain enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. | acetyl-CoA acyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | 0.993 |
SHH36619.1 | SHH71790.1 | SAMN04488135_10351 | SAMN04488135_104294 | Short chain enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. | acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | 0.997 |
SHH36619.1 | SHI03626.1 | SAMN04488135_10351 | SAMN04488135_107159 | Short chain enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. | acetyl-CoA acyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | 0.994 |
SHH36619.1 | SHI21555.1 | SAMN04488135_10351 | SAMN04488135_113129 | Short chain enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. | acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | 0.997 |
SHH36619.1 | SHI45199.1 | SAMN04488135_10351 | SAMN04488135_12429 | Short chain enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. | acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | 0.997 |
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