STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHH38309.1Glyoxylase, beta-lactamase superfamily II. (267 aa)    
Predicted Functional Partners:
SHH38264.1
2-methylcitrate dehydratase PrpD.
       0.773
SHG89167.1
Rhodanese-related sulfurtransferase.
  
 0.739
SHH17685.1
Hypothetical protein.
  
     0.718
SHH81414.1
Amino acid adenylation domain-containing protein.
   
 0.715
SHH06269.1
Hypothetical protein.
  
     0.702
SHG89736.1
Rhodanese-related sulfurtransferase.
  
 0.658
SHH38219.1
2-methylcitrate dehydratase PrpD.
       0.645
SHH17643.1
Pimeloyl-ACP methyl ester carboxylesterase.
  
     0.634
SHG80945.1
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase.
    
  0.618
SHG69195.1
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase.
    
  0.618
Your Current Organism:
Candidimonas bauzanensis
NCBI taxonomy Id: 658167
Other names: Alcaligenaceae bacterium BZ59, C. bauzanensis, CGMCC 1.10190, Candidimonas bauzanensis Zhang et al. 2012, DSM 22805, LMG 26046, LMG:26046, strain BZ59
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