STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHH38442.1Tripartite-type tricarboxylate transporter, receptor component TctC. (326 aa)    
Predicted Functional Partners:
SHH15686.1
Tripartite tricarboxylate transporter TctA family protein.
 
    0.752
SHI23808.1
TctA family transporter.
 
    0.746
SHG89206.1
TctA family transporter.
 
    0.730
SHG89250.1
Tripartite tricarboxylate transporter TctB family protein.
  
    0.718
SHH15726.1
Tripartite tricarboxylate transporter TctB family protein.
  
    0.660
SHI23794.1
Tripartite tricarboxylate transporter TctB family protein.
  
    0.618
SHH38490.1
Regulator of RNase E activity RraA.
       0.572
SHH38535.1
D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
       0.572
SHH38574.1
Quinol monooxygenase YgiN.
       0.572
SHG92212.1
Putative tricarboxylic transport membrane protein.
 
    0.561
Your Current Organism:
Candidimonas bauzanensis
NCBI taxonomy Id: 658167
Other names: Alcaligenaceae bacterium BZ59, C. bauzanensis, CGMCC 1.10190, Candidimonas bauzanensis Zhang et al. 2012, DSM 22805, LMG 26046, LMG:26046, strain BZ59
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