STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHH67701.1Acyl-CoA reductase; Belongs to the aldehyde dehydrogenase family. (471 aa)    
Predicted Functional Partners:
SHH81414.1
Amino acid adenylation domain-containing protein.
   
 0.887
SHH67756.1
Acyl-CoA synthetase (NDP forming).
    
  0.882
SHH67727.1
Enoyl-CoA hydratase/carnithine racemase.
  
 
  0.780
SHG85713.1
phenylacetate-CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA).
    
  0.728
SHH43040.1
phenylacetate-CoA ligase.
    
  0.725
SHH67672.1
Enoyl-CoA hydratase.
  
 
  0.707
SHH68655.1
Glutamate synthase (NADH) large subunit.
  
 
 0.704
SHH43168.1
4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
 0.674
SHH04586.1
Tetratricopeptide repeat-containing protein.
   
 
 0.668
SHH67794.1
Tripartite-type tricarboxylate transporter, receptor component TctC.
       0.664
Your Current Organism:
Candidimonas bauzanensis
NCBI taxonomy Id: 658167
Other names: Alcaligenaceae bacterium BZ59, C. bauzanensis, CGMCC 1.10190, Candidimonas bauzanensis Zhang et al. 2012, DSM 22805, LMG 26046, LMG:26046, strain BZ59
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