STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHH68816.1phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein. (191 aa)    
Predicted Functional Partners:
SHH68761.1
phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein.
 
 0.999
SHH68785.1
phospholipid/cholesterol/gamma-HCH transport system permease protein.
 
 0.999
SHI29390.1
phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein.
  
 0.994
SHI29418.1
phospholipid/cholesterol/gamma-HCH transport system permease protein.
 
 0.994
SHH68873.1
Phospholipid transport system substrate-binding protein.
 
 0.993
SHG81575.1
Phospholipid transport system substrate-binding protein.
 
 0.985
SHH68847.1
Phospholipid-binding lipoprotein MlaA.
 
   
 0.944
SHI29370.1
phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein.
     
 0.907
SHI29352.1
Cholesterol transport system auxiliary component.
  
  0.715
SHH68903.1
ABC-2 type transport system ATP-binding protein.
    
  0.648
Your Current Organism:
Candidimonas bauzanensis
NCBI taxonomy Id: 658167
Other names: Alcaligenaceae bacterium BZ59, C. bauzanensis, CGMCC 1.10190, Candidimonas bauzanensis Zhang et al. 2012, DSM 22805, LMG 26046, LMG:26046, strain BZ59
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