STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHH69631.12-oxo-hept-3-ene-1,7-dioate hydratase. (260 aa)    
Predicted Functional Partners:
SHH69602.1
4-hydroxy-2-oxoheptanedioate aldolase; Belongs to the HpcH/HpaI aldolase family.
 
 0.956
SHH95812.1
2,4-dihydroxyhept-2-enedioate aldolase; Belongs to the HpcH/HpaI aldolase family.
 
 0.872
SHI02426.1
2,4-dihydroxyhept-2-enedioate aldolase; Belongs to the HpcH/HpaI aldolase family.
 
 0.856
SHH69660.1
5-carboxymethyl-2-hydroxymuconate isomerase.
  
 
 0.849
SHH69881.1
4-hydroxy-2-oxoheptanedioate aldolase; Belongs to the HpcH/HpaI aldolase family.
 
 0.833
SHH69688.1
Predicted metal-dependent hydrolase, TIM-barrel fold.
     
 0.776
SHH69715.1
2-iminobutanoate/2-iminopropanoate deaminase.
       0.774
SHI29247.1
Catechol 2,3-dioxygenase.
 
   
 0.750
SHH85148.1
2-keto-3-deoxy-L-rhamnonate aldolase RhmA; Belongs to the HpcH/HpaI aldolase family.
 
 
 0.696
SHH69744.1
Tripartite-type tricarboxylate transporter, receptor component TctC.
       0.686
Your Current Organism:
Candidimonas bauzanensis
NCBI taxonomy Id: 658167
Other names: Alcaligenaceae bacterium BZ59, C. bauzanensis, CGMCC 1.10190, Candidimonas bauzanensis Zhang et al. 2012, DSM 22805, LMG 26046, LMG:26046, strain BZ59
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