STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHH71545.1Uncharacterized OsmC-related protein. (175 aa)    
Predicted Functional Partners:
SHH71573.1
Cytochrome C oxidase, cbb3-type, subunit III.
 
     0.609
SHH71661.1
NitT/TauT family transport system substrate-binding protein.
 
     0.609
SHI21752.1
Dihydrolipoamide dehydrogenase.
    
 0.608
SHH71632.1
NitT/TauT family transport system permease protein.
 
     0.603
SHH13179.1
2-oxoisovalerate dehydrogenase E1 component.
    
  0.576
SHH68132.1
2-oxoisovalerate dehydrogenase E1 component.
    
  0.576
SHI28802.1
2-oxoisovalerate dehydrogenase E1 component.
    
  0.576
SHH71602.1
NitT/TauT family transport system ATP-binding protein.
       0.531
SHH71842.1
3-methylcrotonyl-CoA carboxylase alpha subunit.
    
  0.531
SHH71814.1
3-methylcrotonyl-CoA carboxylase beta subunit.
    
  0.516
Your Current Organism:
Candidimonas bauzanensis
NCBI taxonomy Id: 658167
Other names: Alcaligenaceae bacterium BZ59, C. bauzanensis, CGMCC 1.10190, Candidimonas bauzanensis Zhang et al. 2012, DSM 22805, LMG 26046, LMG:26046, strain BZ59
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.