STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHH73423.1Tripartite-type tricarboxylate transporter, receptor component TctC. (320 aa)    
Predicted Functional Partners:
SHH15686.1
Tripartite tricarboxylate transporter TctA family protein.
 
    0.814
SHI23808.1
TctA family transporter.
 
    0.813
SHG89206.1
TctA family transporter.
 
    0.812
SHH73392.1
Malate/lactate/ureidoglycolate dehydrogenase, LDH2 family; Belongs to the LDH2/MDH2 oxidoreductase family.
       0.773
SHG92212.1
Putative tricarboxylic transport membrane protein.
  
    0.757
SHG88517.1
TctA family transporter.
  
    0.738
kdsA
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase); Belongs to the KdsA family.
       0.605
SHG89250.1
Tripartite tricarboxylate transporter TctB family protein.
  
    0.478
SHH73457.1
DNA-binding transcriptional regulator, GntR family.
       0.470
SHH15726.1
Tripartite tricarboxylate transporter TctB family protein.
  
    0.438
Your Current Organism:
Candidimonas bauzanensis
NCBI taxonomy Id: 658167
Other names: Alcaligenaceae bacterium BZ59, C. bauzanensis, CGMCC 1.10190, Candidimonas bauzanensis Zhang et al. 2012, DSM 22805, LMG 26046, LMG:26046, strain BZ59
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