STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHH65555.1Glyoxylase, beta-lactamase superfamily II. (265 aa)    
Predicted Functional Partners:
SHH81414.1
Amino acid adenylation domain-containing protein.
   
 0.715
SHH65530.1
Tripartite-type tricarboxylate transporter, receptor component TctC.
       0.705
SHH65586.1
3-hydroxyisobutyrate dehydrogenase.
  
    0.673
truA
tRNA pseudouridine38-40 synthase; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.
 
 
 
 0.620
SHG80945.1
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase.
    
  0.618
SHG69195.1
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase.
    
  0.618
SHH86122.1
Sulfide:quinone oxidoreductase.
    
  0.618
SHI27522.1
Thioredoxin reductase.
    
  0.618
SHI36170.1
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase.
    
  0.618
SHH65610.1
Protein of unknown function.
       0.610
Your Current Organism:
Candidimonas bauzanensis
NCBI taxonomy Id: 658167
Other names: Alcaligenaceae bacterium BZ59, C. bauzanensis, CGMCC 1.10190, Candidimonas bauzanensis Zhang et al. 2012, DSM 22805, LMG 26046, LMG:26046, strain BZ59
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