Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHH20557.1 | SHH51267.1 | SAMN04488135_102453 | SAMN04488135_103409 | Acetyl-CoA acetyltransferase. | Hypothetical protein. | 0.746 |
SHH20557.1 | SHH65709.1 | SAMN04488135_102453 | SAMN04488135_10491 | Acetyl-CoA acetyltransferase. | Enoyl-CoA hydratase/carnithine racemase; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.776 |
SHH20557.1 | SHH65739.1 | SAMN04488135_102453 | SAMN04488135_10492 | Acetyl-CoA acetyltransferase. | Hypothetical protein. | 0.943 |
SHH20557.1 | SHH65840.1 | SAMN04488135_102453 | SAMN04488135_10495 | Acetyl-CoA acetyltransferase. | enoyl-CoA hydratase. | 0.776 |
SHH20557.1 | SHH81414.1 | SAMN04488135_102453 | SAMN04488135_10548 | Acetyl-CoA acetyltransferase. | Amino acid adenylation domain-containing protein. | 0.804 |
SHH20901.1 | SHH51267.1 | SAMN04488135_102461 | SAMN04488135_103409 | Acetyl-CoA acetyltransferase. | Hypothetical protein. | 0.736 |
SHH20901.1 | SHH65709.1 | SAMN04488135_102461 | SAMN04488135_10491 | Acetyl-CoA acetyltransferase. | Enoyl-CoA hydratase/carnithine racemase; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.776 |
SHH20901.1 | SHH65739.1 | SAMN04488135_102461 | SAMN04488135_10492 | Acetyl-CoA acetyltransferase. | Hypothetical protein. | 0.943 |
SHH20901.1 | SHH65840.1 | SAMN04488135_102461 | SAMN04488135_10495 | Acetyl-CoA acetyltransferase. | enoyl-CoA hydratase. | 0.776 |
SHH20901.1 | SHH81414.1 | SAMN04488135_102461 | SAMN04488135_10548 | Acetyl-CoA acetyltransferase. | Amino acid adenylation domain-containing protein. | 0.804 |
SHH36571.1 | SHH65709.1 | SAMN04488135_10350 | SAMN04488135_10491 | acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | Enoyl-CoA hydratase/carnithine racemase; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.777 |
SHH36571.1 | SHH65739.1 | SAMN04488135_10350 | SAMN04488135_10492 | acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | Hypothetical protein. | 0.761 |
SHH36571.1 | SHH65840.1 | SAMN04488135_10350 | SAMN04488135_10495 | acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | enoyl-CoA hydratase. | 0.776 |
SHH36571.1 | SHH81414.1 | SAMN04488135_10350 | SAMN04488135_10548 | acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | Amino acid adenylation domain-containing protein. | 0.804 |
SHH39431.1 | SHH65709.1 | SAMN04488135_103113 | SAMN04488135_10491 | PAS domain S-box-containing protein. | Enoyl-CoA hydratase/carnithine racemase; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.945 |
SHH39431.1 | SHH65840.1 | SAMN04488135_103113 | SAMN04488135_10495 | PAS domain S-box-containing protein. | enoyl-CoA hydratase. | 0.945 |
SHH39431.1 | SHH81414.1 | SAMN04488135_103113 | SAMN04488135_10548 | PAS domain S-box-containing protein. | Amino acid adenylation domain-containing protein. | 0.907 |
SHH51267.1 | SHH20557.1 | SAMN04488135_103409 | SAMN04488135_102453 | Hypothetical protein. | Acetyl-CoA acetyltransferase. | 0.746 |
SHH51267.1 | SHH20901.1 | SAMN04488135_103409 | SAMN04488135_102461 | Hypothetical protein. | Acetyl-CoA acetyltransferase. | 0.736 |
SHH51267.1 | SHH65709.1 | SAMN04488135_103409 | SAMN04488135_10491 | Hypothetical protein. | Enoyl-CoA hydratase/carnithine racemase; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.776 |
page 1 of 4