STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHH81963.1Outer membrane transport energization protein ExbB (TC 2.C.1.1.1). (185 aa)    
Predicted Functional Partners:
SHH81987.1
Hypothetical protein.
 
  
 0.977
SHH82006.1
Cobaltochelatase CobN subunit.
 
    0.932
SHH81943.1
Vitamin B12 transporter.
 
  
 0.911
SHG68180.1
Hypothetical protein.
 
  
 0.902
SHH70365.1
Hypothetical protein.
 
  
 0.902
SHG68318.1
Cobaltochelatase CobN.
 
    0.841
SHH70427.1
Cobaltochelatase CobN.
 
    0.839
SHH24612.1
Biopolymer transport protein ExbD.
  
 
 0.789
SHI03547.1
Biopolymer transport protein ExbD.
  
 
 0.789
SHI01802.1
Outer membrane transport energization protein ExbD (TC 2.C.1.1.1).
  
 
 0.789
Your Current Organism:
Candidimonas bauzanensis
NCBI taxonomy Id: 658167
Other names: Alcaligenaceae bacterium BZ59, C. bauzanensis, CGMCC 1.10190, Candidimonas bauzanensis Zhang et al. 2012, DSM 22805, LMG 26046, LMG:26046, strain BZ59
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.