node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHG86976.1 | SHG87751.1 | SAMN04488135_101472 | SAMN04488135_101497 | SSU ribosomal protein S1P; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. | ATP-dependent RNA helicase DbpA; Belongs to the DEAD box helicase family. | 0.923 |
SHG86976.1 | SHH53857.1 | SAMN04488135_101472 | SAMN04488135_103472 | SSU ribosomal protein S1P; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. | Exoribonuclease-2. | 0.729 |
SHG86976.1 | SHI26686.1 | SAMN04488135_101472 | SAMN04488135_11786 | SSU ribosomal protein S1P; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. | ATP-dependent helicase HrpA. | 0.984 |
SHG86976.1 | guaA | SAMN04488135_101472 | SAMN04488135_10914 | SSU ribosomal protein S1P; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. | GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP. | 0.832 |
SHG86976.1 | rnr | SAMN04488135_101472 | SAMN04488135_10752 | SSU ribosomal protein S1P; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. | RNAse R; 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs. | 0.729 |
SHG86976.1 | rph | SAMN04488135_101472 | SAMN04488135_10577 | SSU ribosomal protein S1P; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. | RNAse PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. | 0.932 |
SHG86976.1 | rpsD | SAMN04488135_101472 | SAMN04488135_108181 | SSU ribosomal protein S1P; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. | SSU ribosomal protein S4P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.999 |
SHG86976.1 | rpsK | SAMN04488135_101472 | SAMN04488135_108182 | SSU ribosomal protein S1P; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. | SSU ribosomal protein S11P; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family. | 0.999 |
SHG87751.1 | SHG86976.1 | SAMN04488135_101497 | SAMN04488135_101472 | ATP-dependent RNA helicase DbpA; Belongs to the DEAD box helicase family. | SSU ribosomal protein S1P; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. | 0.923 |
SHG87751.1 | SHH53857.1 | SAMN04488135_101497 | SAMN04488135_103472 | ATP-dependent RNA helicase DbpA; Belongs to the DEAD box helicase family. | Exoribonuclease-2. | 0.499 |
SHG87751.1 | SHI26686.1 | SAMN04488135_101497 | SAMN04488135_11786 | ATP-dependent RNA helicase DbpA; Belongs to the DEAD box helicase family. | ATP-dependent helicase HrpA. | 0.943 |
SHG87751.1 | rnr | SAMN04488135_101497 | SAMN04488135_10752 | ATP-dependent RNA helicase DbpA; Belongs to the DEAD box helicase family. | RNAse R; 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs. | 0.525 |
SHG87751.1 | rph | SAMN04488135_101497 | SAMN04488135_10577 | ATP-dependent RNA helicase DbpA; Belongs to the DEAD box helicase family. | RNAse PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. | 0.847 |
SHG87751.1 | rpsD | SAMN04488135_101497 | SAMN04488135_108181 | ATP-dependent RNA helicase DbpA; Belongs to the DEAD box helicase family. | SSU ribosomal protein S4P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.935 |
SHG87751.1 | rpsK | SAMN04488135_101497 | SAMN04488135_108182 | ATP-dependent RNA helicase DbpA; Belongs to the DEAD box helicase family. | SSU ribosomal protein S11P; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family. | 0.907 |
SHH53857.1 | SHG86976.1 | SAMN04488135_103472 | SAMN04488135_101472 | Exoribonuclease-2. | SSU ribosomal protein S1P; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. | 0.729 |
SHH53857.1 | SHG87751.1 | SAMN04488135_103472 | SAMN04488135_101497 | Exoribonuclease-2. | ATP-dependent RNA helicase DbpA; Belongs to the DEAD box helicase family. | 0.499 |
SHH53857.1 | SHI26686.1 | SAMN04488135_103472 | SAMN04488135_11786 | Exoribonuclease-2. | ATP-dependent helicase HrpA. | 0.533 |
SHH53857.1 | rph | SAMN04488135_103472 | SAMN04488135_10577 | Exoribonuclease-2. | RNAse PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. | 0.991 |
SHH53857.1 | rpsD | SAMN04488135_103472 | SAMN04488135_108181 | Exoribonuclease-2. | SSU ribosomal protein S4P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.540 |